Publications by Petter Holland
23 publications found
Original articles
Epigenetic aging of human blood cells is influenced by the age of the host body
Aging Cell, e14112 (in press)
DOI 10.1111/acel.14112, PubMed 38439206
Mitotic chromosome condensation resets chromatin to safeguard transcriptional homeostasis during interphase
Proc Natl Acad Sci U S A, 120 (4), e2210593120
DOI 10.1073/pnas.2210593120, PubMed 36656860
Post-acute symptoms 3-15 months after COVID-19 among unvaccinated and vaccinated individuals with a breakthrough infection
Int J Infect Dis, 126, 10-13
DOI 10.1016/j.ijid.2022.11.009, PubMed 36375693
Cri du chat syndrome patients have DNA methylation changes in genes linked to symptoms of the disease
Clin Epigenetics, 14 (1), 128
DOI 10.1186/s13148-022-01350-3, PubMed 36242045
Prevention of covid-19 and other acute respiratory infections with cod liver oil supplementation, a low dose vitamin D supplement: quadruple blinded, randomised placebo controlled trial
BMJ, 378, e071245
DOI 10.1136/bmj-2022-071245, PubMed 36215222
Computed tomography with segmentation and quantification of individual organs in a D. melanogaster tumor model
Sci Rep, 12 (1), 2056
DOI 10.1038/s41598-022-05991-5, PubMed 35136137
Host autophagy mediates organ wasting and nutrient mobilization for tumor growth
EMBO J, 40 (18), e107336
DOI 10.15252/embj.2020107336, PubMed 34309071
Natural abundance isotope ratios to differentiate sources of carbon used during tumor growth in vivo
BMC Biol, 19 (1), 85
DOI 10.1186/s12915-021-01012-5, PubMed 33966633
ChIP-exo analysis highlights Fkh1 and Fkh2 transcription factors as hubs that integrate multi-scale networks in budding yeast
Nucleic Acids Res, 47 (15), 7825-7841
DOI 10.1093/nar/gkz603, PubMed 31299083
A bioinformatic pipeline to analyze ChIP-exo datasets
Biol Methods Protoc, 4 (1), bpz011
DOI 10.1093/biomethods/bpz011, PubMed 32395628
Predictive models of eukaryotic transcriptional regulation reveals changes in transcription factor roles and promoter usage between metabolic conditions
Nucleic Acids Res, 47 (10), 4986-5000
DOI 10.1093/nar/gkz253, PubMed 30976803
Saccharomyces cerevisiae displays a stable transcription start site landscape in multiple conditions
FEMS Yeast Res, 19 (2)
DOI 10.1093/femsyr/foy128, PubMed 30590648
Integrated analysis of the yeast NADPH-regulator Stb5 reveals distinct differences in NADPH requirements and regulation in different states of yeast metabolism
FEMS Yeast Res, 18 (8)
DOI 10.1093/femsyr/foy091, PubMed 30107458
Reconstruction of a Global Transcriptional Regulatory Network for Control of Lipid Metabolism in Yeast by Using Chromatin Immunoprecipitation with Lambda Exonuclease Digestion
mSystems, 3 (4)
DOI 10.1128/mSystems.00215-17, PubMed 30073202
Rab7b modulates autophagic flux by interacting with Atg4B
EMBO Rep, 18 (10), 1727-1739
DOI 10.15252/embr.201744069, PubMed 28835545
HS1BP3 negatively regulates autophagy by modulation of phosphatidic acid levels
Nat Commun, 7, 13889
DOI 10.1038/ncomms13889, PubMed 28004827
RAB24 facilitates clearance of autophagic compartments during basal conditions
Autophagy, 11 (10), 1833-48
DOI 10.1080/15548627.2015.1086522, PubMed 26325487
Deubiquitinase inhibition by WP1130 leads to ULK1 aggregation and blockade of autophagy
Autophagy, 11 (9), 1458-70
DOI 10.1080/15548627.2015.1067359, PubMed 26207339
Expression of a ULK1/2 binding-deficient ATG13 variant can partially restore autophagic activity in ATG13-deficient cells
Autophagy, 11 (9), 1471-83
DOI 10.1080/15548627.2015.1068488, PubMed 26213203
LYST affects lysosome size and quantity, but not trafficking or degradation through autophagy or endocytosis
Traffic, 15 (12), 1390-405
DOI 10.1111/tra.12227, PubMed 25216107
Review articles
Complex Relations Between Phospholipids, Autophagy, and Neutral Lipids
Trends Biochem Sci, 41 (11), 907-923
DOI 10.1016/j.tibs.2016.08.001, PubMed 27595473
Other articles
HS1BP3 inhibits autophagy by regulation of PLD1
Autophagy, 13 (5), 985-986
DOI 10.1080/15548627.2017.1291483, PubMed 28318354
Actin shapes the autophagosome
Nat Cell Biol, 17 (9), 1094-6
DOI 10.1038/ncb3224, PubMed 26316454