Publication list - Publika - Scientific publications from Oslo University Hospital

Publications by Bjørn Høyheim

22 publications found

Original articles

Ramberg S, Høyheim B, Østbye TK, Andreassen R (2021)
A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon
Front Genet, 12, 656334
DOI 10.3389/fgene.2021.656334, PubMed 33986770

Woldemariam NT, Agafonov O, Sindre H, Høyheim B, Houston RD, Robledo D, Bron JE, Andreassen R (2020)
miRNAs Predicted to Regulate Host Anti-viral Gene Pathways in IPNV-Challenged Atlantic Salmon Fry Are Affected by Viral Load, and Associated With the Major IPN Resistance QTL Genotypes in Late Infection
Front Immunol, 11, 2113
DOI 10.3389/fimmu.2020.02113, PubMed 33013890

Woldemariam NT, Agafonov O, Høyheim B, Houston RD, Taggart JB, Andreassen R (2019)
Expanding the miRNA Repertoire in Atlantic Salmon; Discovery of IsomiRs and miRNAs Highly Expressed in Different Tissues and Developmental Stages
Cells, 8 (1)
DOI 10.3390/cells8010042, PubMed 30641951

Andreassen R, Woldemariam NT, Egeland IØ, Agafonov O, Sindre H, Høyheim B (2017)
Identification of differentially expressed Atlantic salmon miRNAs responding to salmonid alphavirus (SAV) infection
BMC Genomics, 18 (1), 349
DOI 10.1186/s12864-017-3741-3, PubMed 28472924

Andreassen R, Høyheim B (2017)
miRNAs associated with immune response in teleost fish
Dev Comp Immunol, 75, 77-85
DOI 10.1016/j.dci.2017.02.023, PubMed 28254620

Andreassen R, Worren MM, Høyheim B (2013)
Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
BMC Genomics, 14, 482
DOI 10.1186/1471-2164-14-482, PubMed 23865519

Andreassen R, Lunner S, Høyheim B (2010)
Targeted SNP discovery in Atlantic salmon (Salmo salar) genes using a 3'UTR-primed SNP detection approach
BMC Genomics, 11, 706
DOI 10.1186/1471-2164-11-706, PubMed 21159188

Glover KA, Hansen MM, Lien S, Als TD, Høyheim B, Skaala O (2010)
A comparison of SNP and STR loci for delineating population structure and performing individual genetic assignment
BMC Genet, 11, 2
DOI 10.1186/1471-2156-11-2, PubMed 20051144

Andreassen R, Lunner S, Høyheim B (2009)
Characterization of full-length sequenced cDNA inserts (FLIcs) from Atlantic salmon (Salmo salar)
BMC Genomics, 10, 502
DOI 10.1186/1471-2164-10-502, PubMed 19878547

Danzmann RG, Davidson EA, Ferguson MM, Gharbi K, Koop BF, Hoyheim B, Lien S, Lubieniecki KP, Moghadam HK, Park J, Phillips RB, Davidson WS (2008)
Distribution of ancestral proto-Actinopterygian chromosome arms within the genomes of 4R-derivative salmonid fishes (Rainbow trout and Atlantic salmon)
BMC Genomics, 9, 557
DOI 10.1186/1471-2164-9-557, PubMed 19032764

Rebl A, Høyheim B, Fischer U, Köllner B, Siegl E, Seyfert HM (2008)
Tollip, a negative regulator of TLR-signalling, is encoded by twin genes in salmonid fish
Fish Shellfish Immunol, 25 (1-2), 153-62
DOI 10.1016/j.fsi.2008.04.002, PubMed 18502148

Adzhubei AA, Vlasova AV, Hagen-Larsen H, Ruden TA, Laerdahl JK, Høyheim B (2007)
Annotated expressed sequence tags (ESTs) from pre-smolt Atlantic salmon (Salmo salar) in a searchable data resource
BMC Genomics, 8, 209
DOI 10.1186/1471-2164-8-209, PubMed 17605782

Thorsen J, Høyheim B, Koppang EO (2006)
Isolation of the Atlantic salmon tyrosinase gene family reveals heterogenous transcripts in a leukocyte cell line
Pigment Cell Res, 19 (4), 327-36
DOI 10.1111/j.1600-0749.2006.00319.x, PubMed 16827751

Gharbi K, Gautier A, Danzmann RG, Gharbi S, Sakamoto T, Høyheim B, Taggart JB, Cairney M, Powell R, Krieg F, Okamoto N, Ferguson MM, Holm LE, Guyomard R (2006)
A linkage map for brown trout (Salmo trutta): chromosome homeologies and comparative genome organization with other salmonid fish
Genetics, 172 (4), 2405-19
DOI 10.1534/genetics.105.048330, PubMed 16452148

Hagen-Larsen H, Laerdahl JK, Panitz F, Adzhubei A, Høyheim B (2005)
An EST-based approach for identifying genes expressed in the intestine and gills of pre-smolt Atlantic salmon (Salmo salar)
BMC Genomics, 6, 171
DOI 10.1186/1471-2164-6-171, PubMed 16321156

Ng SH, Artieri CG, Bosdet IE, Chiu R, Danzmann RG, Davidson WS, Ferguson MM, Fjell CD, Hoyheim B, Jones SJ, de Jong PJ, Koop BF, Krzywinski MI, Lubieniecki K, Marra MA, Mitchell LA, Mathewson C, Osoegawa K, Parisotto SE, Phillips RB, Rise ML, von Schalburg KR, Schein JE, Shin H, Siddiqui A et al. (2005)
A physical map of the genome of Atlantic salmon, Salmo salar
Genomics, 86 (4), 396-404
DOI 10.1016/j.ygeno.2005.06.001, PubMed 16026963

Thorsen J, Zhu B, Frengen E, Osoegawa K, de Jong PJ, Koop BF, Davidson WS, Høyheim B (2005)
A highly redundant BAC library of Atlantic salmon (Salmo salar): an important tool for salmon projects
BMC Genomics, 6, 50
DOI 10.1186/1471-2164-6-50, PubMed 15807896

Woram RA, Gharbi K, Sakamoto T, Hoyheim B, Holm LE, Naish K, McGowan C, Ferguson MM, Phillips RB, Stein J, Guyomard R, Cairney M, Taggart JB, Powell R, Davidson W, Danzmann RG (2003)
Comparative genome analysis of the primary sex-determining locus in salmonid fishes
Genome Res, 13 (2), 272-80
DOI 10.1101/gr.578503, PubMed 12566405

Grimholt U, Drabløs F, Jørgensen SM, Høyheim B, Stet RJ (2002)
The major histocompatibility class I locus in Atlantic salmon (Salmo salar L.): polymorphism, linkage analysis and protein modelling
Immunogenetics, 54 (8), 570-81
DOI 10.1007/s00251-002-0499-8, PubMed 12439620

Koss-Harnes D, Høyheim B, Anton-Lamprecht I, Gjesti A, Jørgensen RS, Jahnsen FL, Olaisen B, Wiche G, Gedde-Dahl T (2002)
A site-specific plectin mutation causes dominant epidermolysis bullosa simplex Ogna: two identical de novo mutations
J Invest Dermatol, 118 (1), 87-93
DOI 10.1046/j.0022-202x.2001.01591.x, PubMed 11851880