Publications by Erling Christen Seeberg
99 publications found
Original articles
Repair and mutagenesis at oxidized DNA lesions in the developing brain of wild-type and Ogg1-/- mice
Oncogene, 25 (17), 2425-32
DOI 10.1038/sj.onc.1209284, PubMed 16369492
Human cytomegalovirus infection modulates DNA base excision repair in fibroblast cells
Virology, 348 (2), 389-97
DOI 10.1016/j.virol.2006.01.001, PubMed 16476462
Antimutator role of DNA glycosylase MutY in pathogenic Neisseria species
J Bacteriol, 187 (8), 2801-9
DOI 10.1128/JB.187.8.2801-2809.2005, PubMed 15805527
Product inhibition and magnesium modulate the dual reaction mode of hOgg1
DNA Repair (Amst), 4 (3), 381-7
DOI 10.1016/j.dnarep.2004.11.002, PubMed 15661661
Impaired base excision repair and accumulation of oxidative base lesions in CD4+ T cells of HIV-infected patients
Blood, 105 (12), 4730-5
DOI 10.1182/blood-2004-11-4272, PubMed 15705786
Dynamic relocalization of hOGG1 during the cell cycle is disrupted in cells harbouring the hOGG1-Cys326 polymorphic variant
Nucleic Acids Res, 33 (6), 1813-24
DOI 10.1093/nar/gki325, PubMed 15800211
Predicting non-coding RNA genes in Escherichia coli with boosted genetic programming
Nucleic Acids Res, 33 (10), 3263-70
DOI 10.1093/nar/gki644, PubMed 15942029
Biochemical characterization and DNA repair pathway interactions of Mag1-mediated base excision repair in Schizosaccharomyces pombe
Nucleic Acids Res, 33 (3), 1123-31
DOI 10.1093/nar/gki259, PubMed 15722486
AlkB restores the biological function of mRNA and tRNA inactivated by chemical methylation
Mol Cell, 16 (1), 107-16
DOI 10.1016/j.molcel.2004.09.002, PubMed 15469826
Mutant huntingtin impairs axonal trafficking in mammalian neurons in vivo and in vitro
Mol Cell Biol, 24 (18), 8195-209
DOI 10.1128/MCB.24.18.8195-8209.2004, PubMed 15340079
Base J, found in nuclear DNA of Trypanosoma brucei, is not a target for DNA glycosylases
DNA Repair (Amst), 3 (2), 145-54
DOI 10.1016/j.dnarep.2003.10.009, PubMed 14706348
The Bacillus subtilis counterpart of the mammalian 3-methyladenine DNA glycosylase has hypoxanthine and 1,N6-ethenoadenine as preferred substrates
J Biol Chem, 279 (14), 13601-6
DOI 10.1074/jbc.M314277200, PubMed 14729667
Substrate specificities of bacterial and human AlkB proteins
Nucleic Acids Res, 32 (11), 3456-61
DOI 10.1093/nar/gkh655, PubMed 15229293
A general role of the DNA glycosylase Nth1 in the abasic sites cleavage step of base excision repair in Schizosaccharomyces pombe
Nucleic Acids Res, 32 (17), 5119-25
DOI 10.1093/nar/gkh851, PubMed 15452279
Biased distribution of DNA uptake sequences towards genome maintenance genes
Nucleic Acids Res, 32 (3), 1050-8
DOI 10.1093/nar/gkh255, PubMed 14960717
Mutagenicity, toxicity and repair of DNA base damage induced by oxidation
Mutat Res, 531 (1-2), 37-80
DOI 10.1016/j.mrfmmm.2003.07.002, PubMed 14637246
Better late than never for repair of miscoding lesions within a transcribed template
Mol Cell, 12 (4), 799-800
DOI 10.1016/s1097-2765(03)00403-9, PubMed 14580331
Proliferation failure and gamma radiation sensitivity of Fen1 null mutant mice at the blastocyst stage
Mol Cell Biol, 23 (15), 5346-53
DOI 10.1128/MCB.23.15.5346-5353.2003, PubMed 12861020
Incision at hypoxanthine residues in DNA by a mammalian homologue of the Escherichia coli antimutator enzyme endonuclease V
Nucleic Acids Res, 31 (14), 3893-900
DOI 10.1093/nar/gkg472, PubMed 12853604
Comparative analysis of 8-oxoG:C, 8-oxoG:A, A:C and C:C DNA repair in extracts from wild type or 8-oxoG DNA glycosylase deficient mammalian and bacterial cells
DNA Repair (Amst), 2 (6), 707-18
DOI 10.1016/s1568-7864(03)00041-7, PubMed 12767349
Normal somatic hypermutation of Ig genes in the absence of 8-hydroxyguanine-DNA glycosylase
J Immunol, 170 (11), 5558-62
DOI 10.4049/jimmunol.170.11.5558, PubMed 12759433
WRN interacts physically and functionally with the recombination mediator protein RAD52
J Biol Chem, 278 (38), 36476-86
DOI 10.1074/jbc.M303885200, PubMed 12750383
A new Schizosaccharomyces pombe base excision repair mutant, nth1, reveals overlapping pathways for repair of DNA base damage
Mol Microbiol, 48 (2), 465-80
DOI 10.1046/j.1365-2958.2003.03440.x, PubMed 12675805
Base excision repair activities required for yeast to attain a full chronological life span
Aging Cell, 2 (2), 93-104
DOI 10.1046/j.1474-9728.2003.00041.x, PubMed 12882322
Human and bacterial oxidative demethylases repair alkylation damage in both RNA and DNA
Nature, 421 (6925), 859-63
DOI 10.1038/nature01363, PubMed 12594517
Limited repair of 8-hydroxy-7,8-dihydroguanine residues in human testicular cells
Nucleic Acids Res, 31 (4), 1351-63
DOI 10.1093/nar/gkg216, PubMed 12582255
Human DNA glycosylases of the bacterial Fpg/MutM superfamily: an alternative pathway for the repair of 8-oxoguanine and other oxidation products in DNA
Nucleic Acids Res, 30 (22), 4926-36
DOI 10.1093/nar/gkf618, PubMed 12433996
AlkB-mediated oxidative demethylation reverses DNA damage in Escherichia coli
Nature, 419 (6903), 178-82
DOI 10.1038/nature01048, PubMed 12226668
Human OGG1 undergoes serine phosphorylation and associates with the nuclear matrix and mitotic chromatin in vivo
Nucleic Acids Res, 30 (11), 2349-57
DOI 10.1093/nar/30.11.2349, PubMed 12034821
Reconstitution of the base excision repair pathway for 7,8-dihydro-8-oxoguanine with purified human proteins
Nucleic Acids Res, 30 (10), 2124-30
DOI 10.1093/nar/30.10.2124, PubMed 12000832
Reciprocal "flipping" underlies substrate recognition and catalytic activation by the human 8-oxo-guanine DNA glycosylase
J Mol Biol, 317 (2), 171-7
DOI 10.1006/jmbi.2002.5400, PubMed 11902834
Repair of 8-oxodeoxyguanosine lesions in mitochondrial dna depends on the oxoguanine dna glycosylase (OGG1) gene and 8-oxoguanine accumulates in the mitochondrial dna of OGG1-defective mice
Cancer Res, 61 (14), 5378-81
PubMed 11454679
Cellular effects of 5-formyluracil in DNA
Mutat Res, 486 (2), 147-54
DOI 10.1016/s0921-8777(01)00085-4, PubMed 11425519
Human endonuclease III acts preferentially on DNA damage opposite guanine residues in DNA
Biochemistry, 40 (22), 6653-9
DOI 10.1021/bi0028901, PubMed 11380260
Mutations induced by 5-formyl-2'-deoxyuridine in Escherichia coli include base substitutions that can arise from mispairs of 5-formyluracil with guanine, cytosine and thymine
Mutat Res, 476 (1-2), 99-107
DOI 10.1016/s0027-5107(01)00086-0, PubMed 11336987
Highly efficient base excision repair (BER) in human and rat male germ cells
Nucleic Acids Res, 29 (8), 1781-90
DOI 10.1093/nar/29.8.1781, PubMed 11292851
Overexpression of endonuclease III protects Escherichia coli mutants defective in alkylation repair against lethal effects of methylmethanesulphonate
FEBS Lett, 491 (1-2), 59-62
DOI 10.1016/s0014-5793(01)02156-1, PubMed 11226419
5-Formyluracil and its nucleoside derivatives confer toxicity and mutagenicity to mammalian cells by interfering with normal RNA and DNA metabolism
Toxicol Lett, 119 (1), 71-8
DOI 10.1016/s0378-4274(00)00308-8, PubMed 11275423
Six-fold speed-up of Smith-Waterman sequence database searches using parallel processing on common microprocessors
Bioinformatics, 16 (8), 699-706
DOI 10.1093/bioinformatics/16.8.699, PubMed 11099256
Cell-cycle regulation, intracellular sorting and induced overexpression of the human NTH1 DNA glycosylase involved in removal of formamidopyrimidine residues from DNA
Mutat Res, 460 (2), 95-104
DOI 10.1016/s0921-8777(00)00015-x, PubMed 10882850
Brain hypoplasia caused by exposure to trichlorfon and dichlorvos during development can be ascribed to DNA alkylation damage and inhibition of DNA alkyltransferase repair
Neurotoxicology, 21 (1-2), 165-73
PubMed 10794396
Base removers and strand scissors: different strategies employed in base excision and strand incision at modified base residues in DNA
Cold Spring Harb Symp Quant Biol, 65, 135-42
DOI 10.1101/sqb.2000.65.135, PubMed 12760028
Accumulation of premutagenic DNA lesions in mice defective in removal of oxidative base damage
Proc Natl Acad Sci U S A, 96 (23), 13300-5
DOI 10.1073/pnas.96.23.13300, PubMed 10557315
The Saccharomyces cerevisiae homologues of endonuclease III from Escherichia coli, Ntg1 and Ntg2, are both required for efficient repair of spontaneous and induced oxidative DNA damage in yeast
Mol Cell Biol, 19 (5), 3779-87
DOI 10.1128/MCB.19.5.3779, PubMed 10207101
Genes and enzymes for the removal of oxidative DNA base damage
ALFRED BENZON SYMP S, 44, 272-283
Production, isolation and purification of bacteriocins expressed by two strains of Neisseria meningitidis
APMIS, 106 (12), 1181-7
DOI 10.1111/j.1699-0463.1998.tb00275.x, PubMed 10052727
Growth inhibition of granulocyte-macrophage colony-forming cells by human cytidine deaminase requires the catalytic function of the protein
Blood, 91 (11), 4127-35
DOI 10.1182/blood.V91.11.4127.411k42_4127_4135, PubMed 9596658
Release of normal bases from intact DNA by a native DNA repair enzyme
EMBO J, 17 (2), 363-7
DOI 10.1093/emboj/17.2.363, PubMed 9430628
Effects of chemical-induced DNA damage on male germ cells
Arch Toxicol Suppl, 20, 151-60
DOI 10.1007/978-3-642-46856-8_14, PubMed 9442290
SALSA: improved protein database searching by a new algorithm for assembly of sequence fragments into gapped alignments
Bioinformatics, 14 (10), 839-45
DOI 10.1093/bioinformatics/14.10.839, PubMed 9927712
Opposite base-dependent reactions of a human base excision repair enzyme on DNA containing 7,8-dihydro-8-oxoguanine and abasic sites
EMBO J, 16 (20), 6314-22
DOI 10.1093/emboj/16.20.6314, PubMed 9321410
DNA damage induced by 3-chloro-4-(dichloromethyl)-5-hydroxy-2[5H]-furanone (MX) in HL-60 cells and purified DNA in vitro
Mutat Res, 390 (1-2), 171-8
DOI 10.1016/s0165-1218(97)00016-5, PubMed 9150766
Different efficiencies of the Tag and AlkA DNA glycosylases from Escherichia coli in the removal of 3-methyladenine from single-stranded DNA
FEBS Lett, 397 (1), 127-9
DOI 10.1016/s0014-5793(96)01166-0, PubMed 8941728
Base excision of oxidative purine and pyrimidine DNA damage in Saccharomyces cerevisiae by a DNA glycosylase with sequence similarity to endonuclease III from Escherichia coli
Proc Natl Acad Sci U S A, 93 (20), 10735-40
DOI 10.1073/pnas.93.20.10735, PubMed 8855249
Cloning and expression of a neuronal rat brain glutamate transporter
Brain Res Mol Brain Res, 36 (1), 163-8
DOI 10.1016/0169-328x(95)00279-2, PubMed 9011753
Oxidation of thymine to 5-formyluracil in DNA: mechanisms of formation, structural implications, and base excision by human cell free extracts
Biochemistry, 34 (45), 14758-64
DOI 10.1021/bi00045a017, PubMed 7578084
The base excision repair pathway
Trends Biochem Sci, 20 (10), 391-7
DOI 10.1016/s0968-0004(00)89086-6, PubMed 8533150
Spectrum of mutations induced by methyl and ethyl methanesulfonate at the hprt locus of normal and tag expressing Chinese hamster fibroblasts
Carcinogenesis, 16 (6), 1281-5
DOI 10.1093/carcin/16.6.1281, PubMed 7788844
Purification and properties of the alkylation repair DNA glycosylase encoded the MAG gene from Saccharomyces cerevisiae
Biochemistry, 34 (14), 4577-82
DOI 10.1021/bi00014a010, PubMed 7718559
DNA glycosylase activities for thymine residues oxidized in the methyl group are functions of the AlkA enzyme in Escherichia coli
J Biol Chem, 269 (48), 30489-95
PubMed 7982966
Differential expression of two glial glutamate transporters in the rat brain: an in situ hybridization study
Eur J Neurosci, 6 (6), 936-42
DOI 10.1111/j.1460-9568.1994.tb00587.x, PubMed 7952280
Increased removal of 3-alkyladenine reduces the frequencies of hprt mutations induced by methyl- and ethylmethanesulfonate in Chinese hamster fibroblast cells
Nucleic Acids Res, 22 (9), 1670-4
DOI 10.1093/nar/22.9.1670, PubMed 8202370
Identification of cytidine deaminase as inhibitor of granulocyte-macrophage colony formation
Exp Hematol, 22 (2), 208-14
PubMed 7507861
Physical and genetic mapping of the tag gene on the Escherichia coli chromosome
J Bacteriol, 175 (17), 5733-4
DOI 10.1128/jb.175.17.5733-5734.1993, PubMed 8366063
Excision of 3-methylguanine from alkylated DNA by 3-methyladenine DNA glycosylase I of Escherichia coli
Nucleic Acids Res, 21 (9), 2045-9
DOI 10.1093/nar/21.9.2045, PubMed 8502545
Structure and function of the sodium and potassium-coupled glutamate transporter from rat brain
Biochem Soc Trans, 21 (1), 59-61
DOI 10.1042/bst0210059, PubMed 8095473
Cloning and expression of a rat brain L-glutamate transporter
Nature, 360 (6403), 464-7
DOI 10.1038/360464a0, PubMed 1448170
Expression of the E.coli 3-methyladenine DNA glycosylase I gene in mammalian cells reduces the toxic and mutagenic effects of methylating agents
EMBO J, 11 (12), 4439-44
DOI 10.1002/j.1460-2075.1992.tb05544.x, PubMed 1425578
Cloning and expression in Escherichia coli of a gene for an alkylbase DNA glycosylase from Saccharomyces cerevisiae; a homologue to the bacterial alkA gene
EMBO J, 9 (13), 4563-8
DOI 10.1002/j.1460-2075.1990.tb07909.x, PubMed 2265619
Acetylaminofluorene bound to different guanines of the sequence -GGCGCC- is excised with different efficiencies by the UvrABC excision nuclease in a pattern not correlated to the potency of mutation induction
Proc Natl Acad Sci U S A, 87 (1), 191-4
DOI 10.1073/pnas.87.1.191, PubMed 2296578
Purification and characterization of 3-methyladenine DNA glycosylase I from Escherichia coli
Nucleic Acids Res, 15 (7), 2787-801
DOI 10.1093/nar/15.7.2787, PubMed 3550703
Amplified expression of the tag+ and alkA+ genes in Escherichia coli: identification of gene products and effects on alkylation resistance
J Bacteriol, 168 (2), 642-7
DOI 10.1128/jb.168.2.642-647.1986, PubMed 3536857
Nucleotide sequence of the tag gene from Escherichia coli
Nucleic Acids Res, 14 (9), 3763-72
DOI 10.1093/nar/14.9.3763, PubMed 3520491
Stimulation of the UvrABC enzyme-catalyzed repair reactions by the UvrD protein (DNA helicase II)
Nucleic Acids Res, 13 (5), 1483-92
DOI 10.1093/nar/13.5.1483, PubMed 2987825
pBR322 plasmid DNA modified with 2-acetylaminofluorene derivatives: transforming activity and in vitro strand cleavage by the Escherichia coli uvrABC endonuclease
EMBO J, 3 (4), 757-60
DOI 10.1002/j.1460-2075.1984.tb01880.x, PubMed 6373248
Cloning of Escherichia coli genes encoding 3-methyladenine DNA glycosylases I and II
Mol Gen Genet, 197 (3), 368-72
DOI 10.1007/BF00329931, PubMed 6098799
Strand-break formation in DNA modified by benzo[alpha]pyrene diolepoxide. Quantitative cleavage by Escherichia coli uvrABC endonuclease
Mutat Res, 112 (3), 139-45
DOI 10.1016/0167-8817(83)90036-6, PubMed 6306454
Adaptation to alkylation resistance involves the induction of a DNA glycosylase
Nature, 296 (5859), 773-5
DOI 10.1038/296773a0, PubMed 7040984
Purification and properties of the uvrA protein from Escherichia coli
Proc Natl Acad Sci U S A, 79 (4), 988-92
DOI 10.1073/pnas.79.4.988, PubMed 6280177
Two separable protein species which both restore uvrABC endonuclease activity in extracts from uvrC mutated cells
Biochimie, 64 (8-9), 825-8
DOI 10.1016/s0300-9084(82)80137-5, PubMed 6291642
Strand cleavage at psoralen adducts and pyrimidine dimers in DNA caused by interaction between semi-purified uvr+ gene products from Escherichia coli
Mutat Res, 82 (1), 11-22
DOI 10.1016/0027-5107(81)90133-0, PubMed 6267455
Repair of psoralen plus near ultraviolet light damage in bacteriophages T3 and T4
Photochem Photobiol, 33 (1), 73-78
DOI 10.1111/j.1751-1097.1981.tb04299.x, PubMed 7243904
Multiprotein interactions in strand cleavage of DNA damaged by UV and chemicals
Prog Nucleic Acid Res Mol Biol, 26, 217-26
DOI 10.1016/s0079-6603(08)60406-7, PubMed 6269149
Impaired incision of ultraviolet-irradiated deoxyribonucleic acid in uvrC mutants of Escherichia coli
J Bacteriol, 144 (1), 97-104
DOI 10.1128/jb.144.1.97-104.1980, PubMed 6998973
Escherichia coli mutants deficient in 3-methyladenine-DNA glycosylase
J Mol Biol, 140 (1), 101-27
DOI 10.1016/0022-2836(80)90358-7, PubMed 6997501
Reconstitution of an Escherichia coli repair endonuclease activity from the separated uvrA+ and uvrB+/uvrC+ gene products
Proc Natl Acad Sci U S A, 75 (6), 2569-73
DOI 10.1073/pnas.75.6.2569, PubMed 351611
Incision of ultraviolet-irradiated DNA by extracts of E. coli requires three different gene products
Nature, 263 (5577), 524-6
DOI 10.1038/263524a0, PubMed 787804
Excision repair of ultraviolet-irradiated deoxyribonucleic acid in plasmolyzed cells of Escherichia coli
J Bacteriol, 125 (3), 787-95
DOI 10.1128/jb.125.3.787-795.1976, PubMed 767327
Effect of mutations in lig and polA on UV-induced strand cutting in a uvrC strain of Escherichia coli
Basic Life Sci, 5B, 439-41
DOI 10.1007/978-1-4684-2898-8_3, PubMed 1103860
Incisions in ultraviolet irradiated circular bacteriophage lambda DNA molecules in excision proficient and deficient lysogens of E. coli
Mol Gen Genet, 123 (2), 173-84
DOI 10.1007/BF00267333, PubMed 4579985
Review articles
Transformation and DNA repair: linkage by DNA recombination
Trends Microbiol, 12 (1), 1-4
DOI 10.1016/j.tim.2003.11.008, PubMed 14700543
Microbial fitness and genome dynamics
Trends Microbiol, 9 (8), 356-8
DOI 10.1016/s0966-842x(01)02099-6, PubMed 11519528
Molecular aspects of DNA repair
Mutat Res, 184 (2), 67-86
DOI 10.1016/0167-8817(87)90063-0, PubMed 3306357
Other articles
Workshop on processing of DNA damage
Mutat Res, 364 (3), 245-70
DOI 10.1016/s0921-8777(96)00037-7, PubMed 8960136
Repair of x-ray-induced deoxyribonucleic acid single-strand breaks in xth mutants of Escherichia coli
J Bacteriol, 141 (3), 1424-7
DOI 10.1128/jb.141.3.1424-1427.1980, PubMed 6245070
Books
SpeedGenie User's Guide
MedProbe, Oslo, 89 s.
PublikaID 45
SpeedGenie: demo guide : Windows version 1.1 : sequence database searching software
MedProbe, Oslo, 73 s.
BIBSYS 950678996
Chromosome damage and repair
In NATO advanced study institutes series. Series A, Life sciences, Plenum Press., New York, 40, xiv,623 s.
BIBSYS 833014196, ISBN 0-306-40886-4
DNA excision repair in Escherichia coli
In NDRE/publ, FFI, Kjeller, 80/1001, 90 s.
BIBSYS 81113864x