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Publications (original articles or review articles) published in 2009 from OUS - Department of Microbiology

44 publications found

Ambur OH, Davidsen T, Frye SA, Balasingham SV, Lagesen K, Rognes T, Tønjum T (2009)
Genome dynamics in major bacterial pathogens
FEMS Microbiol Rev, 33 (3), 453-70
DOI 10.1111/j.1574-6976.2009.00173.x, PubMed 19396949

Balasingham SV, Davidsen T, Szpinda I, Frye SA, Tønjum T (2009)
Molecular diagnostics in tuberculosis: basis and implications for therapy
Mol Diagn Ther, 13 (3), 137-51
DOI 10.1007/BF03256322, PubMed 19650669

Boeneman K, Fossum S, Yang Y, Fingland N, Skarstad K, Crooke E (2009)
Escherichia coli DnaA forms helical structures along the longitudinal cell axis distinct from MreB filaments
Mol Microbiol, 72 (3), 645-57
DOI 10.1111/j.1365-2958.2009.06674.x, PubMed 19400775

Dalhus B, Arvai AS, Rosnes I, Olsen ØE, Backe PH, Alseth I, Gao H, Cao W, Tainer JA, Bjørås M (2009)
Structures of endonuclease V with DNA reveal initiation of deaminated adenine repair
Nat Struct Mol Biol, 16 (2), 138-43
DOI 10.1038/nsmb.1538, PubMed 19136958

Dalhus B, Laerdahl JK, Backe PH, Bjørås M (2009)
DNA base repair--recognition and initiation of catalysis
FEMS Microbiol Rev, 33 (6), 1044-78
DOI 10.1111/j.1574-6976.2009.00188.x, PubMed 19659577

Dembinski JL, Krauss S (2009)
Characterization and functional analysis of a slow cycling stem cell-like subpopulation in pancreas adenocarcinoma
Clin Exp Metastasis, 26 (7), 611-23
DOI 10.1007/s10585-009-9260-0, PubMed 19421880

Dos Vultos T, Mestre O, Tonjum T, Gicquel B (2009)
DNA repair in Mycobacterium tuberculosis revisited
FEMS Microbiol Rev, 33 (3), 471-87
DOI 10.1111/j.1574-6976.2009.00170.x, PubMed 19385996

Flem E, Vainio K, Døllner H, Midgaard C, Bosse FJ, Rognlien AG, Rojahn A, Nordbo SA, Størvold G, Njølstad G, Wathne KO, Konsmo K, Aavitsland P (2009)
Rotavirus gastroenteritis in Norway: analysis of prospective surveillance and hospital registry data
Scand J Infect Dis, 41 (10), 753-9
DOI 10.1080/00365540903161515, PubMed 19685376

Forsbring M, Vik ES, Dalhus B, Karlsen TH, Bergquist A, Schrumpf E, Bjørås M, Boberg KM, Alseth I (2009)
Catalytically impaired hMYH and NEIL1 mutant proteins identified in patients with primary sclerosing cholangitis and cholangiocarcinoma
Carcinogenesis, 30 (7), 1147-54
DOI 10.1093/carcin/bgp118, PubMed 19443904

Fredheim EG, Klingenberg C, Rohde H, Frankenberger S, Gaustad P, Flaegstad T, Sollid JE (2009)
Biofilm formation by Staphylococcus haemolyticus
J Clin Microbiol, 47 (4), 1172-80
DOI 10.1128/JCM.01891-08, PubMed 19144798

Hildrestrand GA, Duggal S, Bjørås M, Luna L, Brinchmann JE (2009)
Modulation of DNA glycosylase activities in mesenchymal stem cells
Exp Cell Res, 315 (15), 2558-67
DOI 10.1016/j.yexcr.2009.05.017, PubMed 19477173

Hildrestrand GA, Neurauter CG, Diep DB, Castellanos CG, Krauss S, Bjørås M, Luna L (2009)
Expression patterns of Neil3 during embryonic brain development and neoplasia
BMC Neurosci, 10, 45
DOI 10.1186/1471-2202-10-45, PubMed 19426544

Hol J, Küchler AM, Johansen FE, Dalhus B, Haraldsen G, Oynebråten I (2009)
Molecular requirements for sorting of the chemokine interleukin-8/CXCL8 to endothelial Weibel-Palade bodies
J Biol Chem, 284 (35), 23532-9
DOI 10.1074/jbc.M900874200, PubMed 19578117

Holla ØL, Nakken S, Mattingsdal M, Ranheim T, Berge KE, Defesche JC, Leren TP (2009)
Effects of intronic mutations in the LDLR gene on pre-mRNA splicing: Comparison of wet-lab and bioinformatics analyses
Mol Genet Metab, 96 (4), 245-52
DOI 10.1016/j.ymgme.2008.12.014, PubMed 19208450

Johannessen A, Naman E, Kivuyo SL, Kasubi MJ, Holberg-Petersen M, Matee MI, Gundersen SG, Bruun JN (2009)
Virological efficacy and emergence of drug resistance in adults on antiretroviral treatment in rural Tanzania
BMC Infect Dis, 9, 108
DOI 10.1186/1471-2334-9-108, PubMed 19583845

Kats ES, Enserink JM, Martinez S, Kolodner RD (2009)
The Saccharomyces cerevisiae Rad6 postreplication repair and Siz1/Srs2 homologous recombination-inhibiting pathways process DNA damage that arises in asf1 mutants
Mol Cell Biol, 29 (19), 5226-37
DOI 10.1128/MCB.00894-09, PubMed 19635810

Kran AM, Jonassen TØ, Sannes M, Jakobsen K, Lind A, Maeland A, Holberg-Petersen M (2009)
Overestimation of human immunodeficiency virus type 1 load caused by the presence of cells in plasma from plasma preparation tubes
J Clin Microbiol, 47 (7), 2170-4
DOI 10.1128/JCM.00519-09, PubMed 19420166

Kunke D, Bryja V, Mygland L, Arenas E, Krauss S (2009)
Inhibition of canonical Wnt signaling promotes gliogenesis in P0-NSCs
Biochem Biophys Res Commun, 386 (4), 628-33
DOI 10.1016/j.bbrc.2009.06.084, PubMed 19545542

Leegaard TM, Bootsma HJ, Caugant DA, Eleveld MJ, Mannsåker T, Frøholm LO, Gaustad P, Høiby EA, Hermans PWM (2009)
Phenotypic and genomic characterization of pneumococcus-like streptococci isolated from HIV-seropositive patients
Microbiology (Reading), 156 (Pt 3), 838-848
DOI 10.1099/mic.0.035345-0, PubMed 19959577

Lång E, Haugen K, Fleckenstein B, Homberset H, Frye SA, Ambur OH, Tønjum T (2009)
Identification of neisserial DNA binding components
Microbiology (Reading), 155 (Pt 3), 852-862
DOI 10.1099/mic.0.022640-0, PubMed 19246756

Merckoll P, Jonassen TØ, Vad ME, Jeansson SL, Melby KK (2009)
Bacteria, biofilm and honey: a study of the effects of honey on 'planktonic' and biofilm-embedded chronic wound bacteria
Scand J Infect Dis, 41 (5), 341-7
DOI 10.1080/00365540902849383, PubMed 19308800

Maagaard A, Kvale D (2009)
Mitochondrial toxicity in HIV-infected patients both off and on antiretroviral treatment: a continuum or distinct underlying mechanisms?
J Antimicrob Chemother, 64 (5), 901-9
DOI 10.1093/jac/dkp316, PubMed 19740910

Nakken S, Aussedat O, Kristoffersen AB, Holst-Jensen A, Tengs T (2009)
UniquePrimer - a web utility for design of specific PCR primers and probes
Ann. Microbiol., 59 (2), 391-393
DOI 10.1007/BF03178345

Nakken S, Rognes T, Hovig E (2009)
The disruptive positions in human G-quadruplex motifs are less polymorphic and more conserved than their neutral counterparts
Nucleic Acids Res, 37 (17), 5749-56
DOI 10.1093/nar/gkp590, PubMed 19617376

Nakken S, Rødland EA, Rognes T, Hovig E (2009)
Large-scale inference of the point mutational spectrum in human segmental duplications
BMC Genomics, 10, 43
DOI 10.1186/1471-2164-10-43, PubMed 19161616

Nordlund MS, Warren DJ, Laerdahl JK, Paus E (2009)
Studies on multiple forms of proGRP in serum from small cell lung cancer patients
Tumour Biol, 30 (5-6), 265-75
DOI 10.1159/000258135, PubMed 19907206

Odsbu I, Morigen, Skarstad K (2009)
A reduction in ribonucleotide reductase activity slows down the chromosome replication fork but does not change its localization
PLoS One, 4 (10), e7617
DOI 10.1371/journal.pone.0007617, PubMed 19898675

Olsen I, Balasingham SV, Davidsen T, Debebe E, Rødland EA, van Soolingen D, Kremer K, Alseth I, Tønjum T (2009)
Characterization of the major formamidopyrimidine-DNA glycosylase homolog in Mycobacterium tuberculosis and its linkage to variable tandem repeats
FEMS Immunol Med Microbiol, 56 (2), 151-61
DOI 10.1111/j.1574-695X.2009.00562.x, PubMed 19496823

Robertson AB, Klungland A, Rognes T, Leiros I (2009)
DNA repair in mammalian cells: Base excision repair: the long and short of it
Cell Mol Life Sci, 66 (6), 981-93
DOI 10.1007/s00018-009-8736-z, PubMed 19153658

Rødland EK, Ueland T, Pedersen TM, Halvorsen B, Muller F, Aukrust P, Frøland SS (2009)
Activation of platelets by Aspergillus fumigatus and potential role of platelets in the immunopathogenesis of Aspergillosis
Infect Immun, 78 (3), 1269-75
DOI 10.1128/IAI.01091-09, PubMed 20008537

Samuelsen O, Toleman MA, Sundsfjord A, Rydberg J, Leegaard TM, Walder M, Lia A, Ranheim TE, Rajendra Y, Hermansen NO, Walsh TR, Giske CG (2009)
Molecular epidemiology of metallo-beta-lactamase-producing Pseudomonas aeruginosa isolates from Norway and Sweden shows import of international clones and local clonal expansion
Antimicrob Agents Chemother, 54 (1), 346-52
DOI 10.1128/AAC.00824-09, PubMed 19884381

Sandven I, Abdelnoor M, Nesheim BI, Melby KK (2009)
Helicobacter pylori infection and hyperemesis gravidarum: a systematic review and meta-analysis of case-control studies
Acta Obstet Gynecol Scand, 88 (11), 1190-200
DOI 10.3109/00016340903284927, PubMed 19900137

Sejersted Y, Aasland AL, Bjørås M, Eide L, Saugstad OD (2009)
Accumulation of 8-oxoguanine in liver DNA during hyperoxic resuscitation of newborn mice
Pediatr Res, 66 (5), 533-8
DOI 10.1203/PDR.0b013e3181ba1a42, PubMed 19668103

Skjeldestad FE, Marsico MA, Sings HL, Nordbø SA, Størvold G (2009)
Incidence and risk factors for genital Chlamydia trachomatis infection: a 4-year prospective cohort study
Sex Transm Dis, 36 (5), 273-9
DOI 10.1097/OLQ.0b013e3181924386, PubMed 19265733

Skotheim RI, Thomassen GO, Eken M, Lind GE, Micci F, Ribeiro FR, Cerveira N, Teixeira MR, Heim S, Rognes T, Lothe RA (2009)
A universal assay for detection of oncogenic fusion transcripts by oligo microarray analysis
Mol Cancer, 8, 5
DOI 10.1186/1476-4598-8-5, PubMed 19152679

Straume D, Johansen RF, Bjørås M, Nes IF, Diep DB (2009)
DNA binding kinetics of two response regulators, PlnC and PlnD, from the bacteriocin regulon of Lactobacillus plantarum C11
BMC Biochem, 10, 17
DOI 10.1186/1471-2091-10-17, PubMed 19519894

Talavera A, Friemann R, Gómez-Puerta S, Martinez-Fleites C, Garrido G, Rabasa A, López-Requena A, Pupo A, Johansen RF, Sánchez O, Krengel U, Moreno E (2009)
Nimotuzumab, an antitumor antibody that targets the epidermal growth factor receptor, blocks ligand binding while permitting the active receptor conformation
Cancer Res, 69 (14), 5851-9
DOI 10.1158/0008-5472.CAN-08-4518, PubMed 19584289

Thomassen GO, Rowe AD, Lagesen K, Lindvall JM, Rognes T (2009)
Custom design and analysis of high-density oligonucleotide bacterial tiling microarrays
PLoS One, 4 (6), e5943
DOI 10.1371/journal.pone.0005943, PubMed 19536279

Tibballs KL, Ambur OH, Alfsnes K, Homberset H, Frye SA, Davidsen T, Tønjum T (2009)
Characterization of the meningococcal DNA glycosylase Fpg involved in base excision repair
BMC Microbiol, 9, 7
DOI 10.1186/1471-2180-9-7, PubMed 19134198

Uchtenhagen H, Sourial S, Friemann R, Ehnlund M, Spetz AL, Harris RA, Madhurantakam C, Achour A (2009)
Production, purification, crystallization and preliminary X-ray diffraction analysis of the HIV-2-neutralizing V3 loop-specific Fab fragment 7C8
Acta Crystallogr Sect F Struct Biol Cryst Commun, 65 (Pt 7), 705-8
DOI 10.1107/S1744309109020685, PubMed 19574645

Ussery DW, Kiil K, Lagesen K, Sicheritz-Pontén T, Bohlin J, Wassenaar TM (2009)
The genus burkholderia: analysis of 56 genomic sequences
Genome Dyn, 6, 140-157
DOI 10.1159/000235768, PubMed 19696499

Vainio K, Nordbø SA, Njølstad G, Størvold G, Døllner H, Midgaard C, Bosse FJ, Rognlien AG, Rojahn A, Wathne KO, Flem E (2009)
Detection and characterization of group A rotaviruses in children hospitalized with acute gastroenteritis in Norway, 2006-2008
J Med Virol, 81 (10), 1839-44
DOI 10.1002/jmv.21576, PubMed 19697411

van den Born E, Bekkelund A, Moen MN, Omelchenko MV, Klungland A, Falnes PØ (2009)
Bioinformatics and functional analysis define four distinct groups of AlkB DNA-dioxygenases in bacteria
Nucleic Acids Res, 37 (21), 7124-36
DOI 10.1093/nar/gkp774, PubMed 19786499

Yndestad A, Neurauter CG, Oie E, Forstrøm RJ, Vinge LE, Eide L, Luna L, Aukrust P, Bjørås M (2009)
Up-regulation of myocardial DNA base excision repair activities in experimental heart failure
Mutat Res, 666 (1-2), 32-8
DOI 10.1016/j.mrfmmm.2009.03.008, PubMed 19481677