Publications (original articles or review articles) published in 2022 from OUS - Department of Microbiology
94 publications found
Dynamic features of human mitochondrial DNA maintenance and transcription
Front Cell Dev Biol, 10, 984245
DOI 10.3389/fcell.2022.984245, PubMed 36158192
abc4pwm: affinity based clustering for position weight matrices in applications of DNA sequence analysis
BMC Bioinformatics, 23 (1), 83
DOI 10.1186/s12859-022-04615-z, PubMed 35240993
Ultrafast and Cost-Effective Pathogen Identification and Resistance Gene Detection in a Clinical Setting Using Nanopore Flongle Sequencing
Front Microbiol, 13, 822402
DOI 10.3389/fmicb.2022.822402, PubMed 35369431
Characterization of the Upper Respiratory Bacterial Microbiome in Critically Ill COVID-19 Patients
Biomedicines, 10 (5)
DOI 10.3390/biomedicines10050982, PubMed 35625719
Comparative Genomics of Shiga Toxin-Producing Escherichia coli Strains Isolated from Pediatric Patients with and without Hemolytic Uremic Syndrome from 2000 to 2016 in Finland
Microbiol Spectr, 10 (4), e0066022
DOI 10.1128/spectrum.00660-22, PubMed 35730965
Maternal cytomegalovirus infection and delayed language development in children at 3 years of age-a nested case-control study in a large population-based pregnancy cohort
PLoS One, 17 (12), e0278623
DOI 10.1371/journal.pone.0278623, PubMed 36455052
Symptom-based case definitions for COVID-19: Time and geographical variations for detection at hospital admission among 260,000 patients
Influenza Other Respir Viruses, 16 (6), 1040-1050
DOI 10.1111/irv.13039, PubMed 36825252
Proteome Profiling of Mycobacterium tuberculosis Cells Exposed to Nitrosative Stress
ACS Omega, 7 (4), 3470-3482
DOI 10.1021/acsomega.1c05923, PubMed 35128256
Four SARS-CoV-2 vaccine doses or hybrid immunity in patients on immunosuppressive therapies: a Norwegian cohort study
Lancet Rheumatol, 5 (1), e36-e46
DOI 10.1016/S2665-9913(22)00330-7, PubMed 36415604
Primary vitrectomy or intravitreal antibiotics followed by early vitrectomy for acute endophthalmitis: A prospective observational study
Acta Ophthalmol, 101 (1), 100-108
DOI 10.1111/aos.15207, PubMed 35751448
Association of body mass index with COVID-19 related in-hospital death
Clin Nutr, 41 (12), 2924-2926
DOI 10.1016/j.clnu.2022.01.017, PubMed 35123821
Group B Streptococcus colonization at delivery is associated with maternal peripartum infection
PLoS One, 17 (4), e0264309
DOI 10.1371/journal.pone.0264309, PubMed 35363775
Prevention of covid-19 and other acute respiratory infections with cod liver oil supplementation, a low dose vitamin D supplement: quadruple blinded, randomised placebo controlled trial
BMJ, 378, e071245
DOI 10.1136/bmj-2022-071245, PubMed 36215222
Post-acute symptoms 3-15 months after COVID-19 among unvaccinated and vaccinated individuals with a breakthrough infection
Int J Infect Dis, 126, 10-13
DOI 10.1016/j.ijid.2022.11.009, PubMed 36375693
The burden of hospital-attended influenza in Norwegian children
Front Pediatr, 10, 963274
DOI 10.3389/fped.2022.963274, PubMed 36160779
Transition to PCR diagnosis of cryptosporidiosis and giardiasis in the Norwegian healthcare system: could the increase in reported cases be due to higher sensitivity or a change in the testing algorithm?
Eur J Clin Microbiol Infect Dis, 41 (5), 835-839
DOI 10.1007/s10096-022-04426-3, PubMed 35243573
SMUG1 regulates fat homeostasis leading to a fatty liver phenotype in mice
DNA Repair (Amst), 120, 103410
DOI 10.1016/j.dnarep.2022.103410, PubMed 36244177
Factors Affecting Antibiotic Prescription among Hospital Physicians in a Low-Antimicrobial-Resistance Country: A Qualitative Study
Antibiotics (Basel), 11 (1)
DOI 10.3390/antibiotics11010098, PubMed 35052975
The persistence of anti-Spike antibodies following two SARS-CoV-2 vaccine doses in patients on immunosuppressive therapy compared to healthy controls-a prospective cohort study
BMC Med, 20 (1), 378
DOI 10.1186/s12916-022-02587-8, PubMed 36199139
Novel genes and sex differences in COVID-19 severity
Hum Mol Genet, 31 (22), 3789-3806
DOI 10.1093/hmg/ddac132, PubMed 35708486
Register-based surveillance of COVID-19 in nursing homes
Tidsskr Nor Laegeforen, 142 (8)
DOI 10.4045/tidsskr.21.0906, PubMed 35635409
Clinical Outcome of Viral Respiratory Tract Infections in Hospitalized Adults in Norway: High Degree of Inflammation and Need of Emergency Care for Cases With Respiratory Syncytial Virus
Front Med (Lausanne), 9, 866494
DOI 10.3389/fmed.2022.866494, PubMed 35572955
Detailed stratified GWAS analysis for severe COVID-19 in four European populations
Hum Mol Genet, 31 (23), 3945-3966
DOI 10.1093/hmg/ddac158, PubMed 35848942
Age- and sex-dependent effects of DNA glycosylase Neil3 on amyloid pathology, adult neurogenesis, and memory in a mouse model of Alzheimer's disease
Free Radic Biol Med, 193 (Pt 2), 685-693
DOI 10.1016/j.freeradbiomed.2022.11.020, PubMed 36395955
The use of public transport and contraction of SARS-CoV-2 in a large prospective cohort in Norway
BMC Infect Dis, 22 (1), 252
DOI 10.1186/s12879-022-07233-5, PubMed 35287611
Cell Cycle-Dependent Transcription: The Cyclin Dependent Kinase Cdk1 Is a Direct Regulator of Basal Transcription Machineries
Int J Mol Sci, 23 (3)
DOI 10.3390/ijms23031293, PubMed 35163213
Affinity maturation of TCR-like antibodies using phage display guided by structural modeling
Protein Eng Des Sel, 35
DOI 10.1093/protein/gzac005, PubMed 35871543
Dispersion of SARS-CoV-2 in air surrounding COVID-19-infected individuals with mild symptoms
Indoor Air, 32 (2), e13001
DOI 10.1111/ina.13001, PubMed 35225394
SARS-CoV-2 in the Air Surrounding Patients during Nebulizer Therapy
Can J Infect Dis Med Microbiol, 2022, 9297974
DOI 10.1155/2022/9297974, PubMed 36213437
An international observational study to assess the impact of the Omicron variant emergence on the clinical epidemiology of COVID-19 in hospitalised patients
Elife, 11
DOI 10.7554/eLife.80556, PubMed 36197074
Omicron Variant Generates a Higher and More Sustained Viral Load in Nasopharynx and Saliva Than the Delta Variant of SARS-CoV-2
Viruses, 14 (11)
DOI 10.3390/v14112420, PubMed 36366518
Pseudomonas aeruginosa countrywide outbreak in hospitals linked to pre-moistened non-sterile washcloths, Norway, October 2021 to April 2022
Euro Surveill, 27 (18)
DOI 10.2807/1560-7917.ES.2022.27.18.2200312, PubMed 35514305
SARS-CoV-2 Nsp13 encodes for an HLA-E-stabilizing peptide that abrogates inhibition of NKG2A-expressing NK cells
Cell Rep, 38 (10), 110503
DOI 10.1016/j.celrep.2022.110503, PubMed 35235832
H3K9 dimethylation safeguards cancer cells against activation of the interferon pathway
Sci Adv, 8 (11), eabf8627
DOI 10.1126/sciadv.abf8627, PubMed 35302840
Risk factors associated with severe disease in respiratory syncytial virus infected children under 5 years of age
Front Pediatr, 10, 1004739
DOI 10.3389/fped.2022.1004739, PubMed 36110112
Inflammatory markers calprotectin, NETs, syndecan-1 and neopterin in COVID-19 convalescent blood donors
Scand J Clin Lab Invest, 82 (6), 481-485
DOI 10.1080/00365513.2022.2123387, PubMed 36151851
Elevated NETs and Calprotectin Levels after ChAdOx1 nCoV-19 Vaccination Correlate with the Severity of Side Effects
Vaccines (Basel), 10 (8)
DOI 10.3390/vaccines10081267, PubMed 36016155
Cri du chat syndrome patients have DNA methylation changes in genes linked to symptoms of the disease
Clin Epigenetics, 14 (1), 128
DOI 10.1186/s13148-022-01350-3, PubMed 36242045
DrugVirus.info 2.0: an integrative data portal for broad-spectrum antivirals (BSA) and BSA-containing drug combinations (BCCs)
Nucleic Acids Res, 50 (W1), W272-W275
DOI 10.1093/nar/gkac348, PubMed 35610052
ISARIC-COVID-19 dataset: A Prospective, Standardized, Global Dataset of Patients Hospitalized with COVID-19
Sci Data, 9 (1), 454
DOI 10.1038/s41597-022-01534-9, PubMed 35908040
NEIL3-deficient bone marrow displays decreased hematopoietic capacity and reduced telomere length
Biochem Biophys Rep, 29, 101211
DOI 10.1016/j.bbrep.2022.101211, PubMed 35079641
The Heat Is On: Modeling the Persistence of ESBL-Producing E. coli in Blue Mussels under Meal Preparation
Foods, 12 (1)
DOI 10.3390/foods12010014, PubMed 36613230
Urea derivatives carrying a thiophenylthiazole moiety: Design, synthesis, and evaluation of antitubercular and InhA inhibitory activities
Drug Dev Res, 83 (6), 1292-1304
DOI 10.1002/ddr.21958, PubMed 35769019
Lactate receptor HCAR1 regulates neurogenesis and microglia activation after neonatal hypoxia-ischemia
Elife, 11
DOI 10.7554/eLife.76451, PubMed 35942676
ALKBH5 regulates somatic cell reprogramming in a phase-specific manner
J Cell Sci, 135 (11)
DOI 10.1242/jcs.259824, PubMed 35552718
Isoniazid Linked to Sulfonate Esters via Hydrazone Functionality: Design, Synthesis, and Evaluation of Antitubercular Activity
Pharmaceuticals (Basel), 15 (10)
DOI 10.3390/ph15101301, PubMed 36297413
Linking azoles to isoniazid via hydrazone bridge: Synthesis, crystal structure determination, antitubercular evaluation and computational studies
Journal of Molecular Liquids, 354, 118873
DOI 10.1016/j.molliq.2022.118873, PublikaID 422
Duodenal inflammation in common variable immunodeficiency has altered transcriptional response to viruses
J Allergy Clin Immunol, 151 (3), 767-777
DOI 10.1016/j.jaci.2022.09.029, PubMed 36220400
EWAS of post-COVID-19 patients shows methylation differences in the immune-response associated gene, IFI44L, three months after COVID-19 infection
Sci Rep, 12 (1), 11478
DOI 10.1038/s41598-022-15467-1, PubMed 35798818
A regulatory network comprising let-7 miRNA and SMUG1 is associated with good prognosis in ER+ breast tumours
Nucleic Acids Res, 50 (18), 10449-10468
DOI 10.1093/nar/gkac807, PubMed 36156150
Immobilization of FeFe-hydrogenase on black TiO2 nanotubes as biocathodes for the hydrogen evolution reaction
Electrochemistry Communications, 135, 107221
DOI 10.1016/j.elecom.2022.107221, PublikaID 419
Mechanical coupling of supracellular stress amplification and tissue fluidization during exit from quiescence
Proc Natl Acad Sci U S A, 119 (32), e2201328119
DOI 10.1073/pnas.2201328119, PubMed 35914175
Characterization of a Clostridioides difficile outbreak caused by PCR ribotype 046, associated with increased mortality
Emerg Microbes Infect, 11 (1), 850-859
DOI 10.1080/22221751.2022.2049981, PubMed 35240942
Acute severe hepatitis outbreak in children: A perfect storm. What do we know, and what questions remain?
Front Pharmacol, 13, 1062408
DOI 10.3389/fphar.2022.1062408, PubMed 36506522
C. elegans as an Animal Model to Study the Intersection of DNA Repair, Aging and Neurodegeneration
Front Aging, 3, 916118
DOI 10.3389/fragi.2022.916118, PubMed 35821838
Helicobacter pylori resistance to antibiotics before and after treatment: Incidence of eradication failure
PLoS One, 17 (4), e0265322
DOI 10.1371/journal.pone.0265322, PubMed 35442962
DNA Repair Mechanisms are Activated in Circulating Lymphocytes of Hospitalized Covid-19 Patients
J Inflamm Res, 15, 6629-6644
DOI 10.2147/JIR.S379331, PubMed 36514358
Mapping of pituitary stress-induced gene regulation connects Nrcam to negative emotions
iScience, 25 (9), 104953
DOI 10.1016/j.isci.2022.104953, PubMed 36060062
Malaria prevalence and performance of diagnostic tests among patients hospitalized with acute undifferentiated fever in Zanzibar
Malar J, 21 (1), 54
DOI 10.1186/s12936-022-04067-z, PubMed 35183188
Hepcidin predicts 5-year mortality after community-acquired pneumonia
Infect Dis (Lond), 54 (6), 403-409
DOI 10.1080/23744235.2021.2022194, PubMed 35057702
Epitranscriptome in Ischemic Cardiovascular Disease: Potential Target for Therapies
Stroke, 53 (6), 2114-2122
DOI 10.1161/STROKEAHA.121.037581, PubMed 35240858
Antiviral Immunoglobulins of Chicken Egg Yolk for Potential Prevention of SARS-CoV-2 Infection
Viruses, 14 (10)
DOI 10.3390/v14102121, PubMed 36298676
Clinical characteristics, risk factors and outcomes in patients with severe COVID-19 registered in the International Severe Acute Respiratory and Emerging Infection Consortium WHO clinical characterisation protocol: a prospective, multinational, multicentre, observational study
ERJ Open Res, 8 (1)
DOI 10.1183/23120541.00552-2021, PubMed 35169585
Respiratory support in patients with severe COVID-19 in the International Severe Acute Respiratory and Emerging Infection (ISARIC) COVID-19 study: a prospective, multinational, observational study
Crit Care, 26 (1), 276
DOI 10.1186/s13054-022-04155-1, PubMed 36100904
Multicentre study on the reproducibility of MALDI-TOF MS for nontuberculous mycobacteria identification
Sci Rep, 12 (1), 1237
DOI 10.1038/s41598-022-05315-7, PubMed 35075208
CompAIRR: ultra-fast comparison of adaptive immune receptor repertoires by exact and approximate sequence matching
Bioinformatics, 38 (17), 4230-4232
DOI 10.1093/bioinformatics/btac505, PubMed 35852318
MoDLE: high-performance stochastic modeling of DNA loop extrusion interactions
Genome Biol, 23 (1), 247
DOI 10.1186/s13059-022-02815-7, PubMed 36451166
Vaccine associated benign headache and cutaneous hemorrhage after ChAdOx1 nCoV-19 vaccine: A cohort study
J Stroke Cerebrovasc Dis, 32 (1), 106860
DOI 10.1016/j.jstrokecerebrovasdis.2022.106860, PubMed 36403363
Krill oil protects dopaminergic neurons from age-related degeneration through temporal transcriptome rewiring and suppression of several hallmarks of aging
Aging (Albany NY), 14 (21), 8661-8687
DOI 10.18632/aging.204375, PubMed 36367773
Host Transcriptional Signatures Predict Etiology in Community-Acquired Pneumonia: Potential Antibiotic Stewardship Tools
Biomark Insights, 17, 11772719221099130
DOI 10.1177/11772719221099130, PubMed 35693251
Treatment of Ductal Carcinoma in situ: A Register-Based Study of Norwegian Women Diagnosed between 1995 and 2018
Breast Care (Basel), 17 (5), 486-494
DOI 10.1159/000524564, PubMed 36684407
Sexually transmitted infections among patients attending a sexual assault centre: a cohort study from Oslo, Norway
BMJ Open, 12 (12), e064934
DOI 10.1136/bmjopen-2022-064934, PubMed 36456026
Age and product dependent vaccine effectiveness against SARS-CoV-2 infection and hospitalisation among adults in Norway: a national cohort study, July-November 2021
BMC Med, 20 (1), 278
DOI 10.1186/s12916-022-02480-4, PubMed 36050718
High vaccine effectiveness against coronavirus disease 2019 (COVID-19) and severe disease among residents and staff of long-term care facilities in Norway, November 2020-June 2021
Antimicrob Steward Healthc Epidemiol, 2 (1), e10
DOI 10.1017/ash.2021.246, PubMed 36310780
Characterization of novel small non-coding RNAs and their modifications in bladder cancer using an updated small RNA-seq workflow
Front Mol Biosci, 9, 887686
DOI 10.3389/fmolb.2022.887686, PubMed 35923465
TRMT6/61A-dependent base methylation of tRNA-derived fragments regulates gene-silencing activity and the unfolded protein response in bladder cancer
Nat Commun, 13 (1), 2165
DOI 10.1038/s41467-022-29790-8, PubMed 35444240
RNA m6A modifications in mammalian gametogenesis and pregnancy
Reproduction, 165 (1), R1-R8
DOI 10.1530/REP-22-0112, PubMed 36194446
ZBTB11 dysfunction: spectrum of brain abnormalities, biochemical signature and cellular consequences
Brain, 145 (7), 2602-2616
DOI 10.1093/brain/awac034, PubMed 35104841
Immunogenicity and safety of a three-dose SARS-CoV-2 vaccination strategy in patients with immune-mediated inflammatory diseases on immunosuppressive therapy
RMD Open, 8 (2)
DOI 10.1136/rmdopen-2022-002417, PubMed 36328399
Immunogenicity and Safety of Standard and Third-Dose SARS-CoV-2 Vaccination in Patients Receiving Immunosuppressive Therapy
Arthritis Rheumatol, 74 (8), 1321-1332
DOI 10.1002/art.42153, PubMed 35507355
Breakthrough infections with the omicron and delta variants of SARS-CoV-2 result in similar re-activation of vaccine-induced immunity
Front Immunol, 13, 964525
DOI 10.3389/fimmu.2022.964525, PubMed 36159859
Corticosteroids and superinfections in COVID-19 patients on invasive mechanical ventilation
J Infect, 85 (1), 57-63
DOI 10.1016/j.jinf.2022.05.015, PubMed 35605805
Synthesis, characterization, anti-tuberculosis activity and molecular modeling studies of thiourea derivatives bearing aminoguanidine moiety
Journal of Molecular Structure, 1270, 133899
DOI 10.1016/j.molstruc.2022.133899, PublikaID 421
Titers of antibodies against ancestral SARS-CoV-2 correlate with levels of neutralizing antibodies to multiple variants
NPJ Vaccines, 7 (1), 174
DOI 10.1038/s41541-022-00586-7, PubMed 36585405
Persistent T-cell exhaustion in relation to prolonged pulmonary pathology and death after severe COVID-19: Results from two Norwegian cohort studies
J Intern Med, 292 (5), 816-828
DOI 10.1111/joim.13549, PubMed 35982589
High Circulating Levels of the Homeostatic Chemokines CCL19 and CCL21 Predict Mortality and Disease Severity in COVID-19
J Infect Dis, 226 (12), 2150-2160
DOI 10.1093/infdis/jiac313, PubMed 35876699
Surveillance of leishmaniasis cases from 15 European centres, 2014 to 2019: a retrospective analysis
Euro Surveill, 27 (4)
DOI 10.2807/1560-7917.ES.2022.27.4.2002028, PubMed 35086613
A point-prevalence study on community and inpatient Clostridioides difficile infections (CDI): results from Combatting Bacterial Resistance in Europe CDI (COMBACTE-CDI), July to November 2018
Euro Surveill, 27 (26)
DOI 10.2807/1560-7917.ES.2022.27.26.2100704, PubMed 35775426
Use of an extended KDIGO definition to diagnose acute kidney injury in patients with COVID-19: A multinational study using the ISARIC-WHO clinical characterisation protocol
PLoS Med, 19 (4), e1003969
DOI 10.1371/journal.pmed.1003969, PubMed 35442972
Clinical characteristics and outcomes in hospitalized adult influenza patients: an observational study from Norway 2014-2018
Infect Dis (Lond), 54 (5), 367-377
DOI 10.1080/23744235.2021.2022196, PubMed 34983302
High Prevalence and Persistence of Escherichia coli Strains Producing Shiga Toxin Subtype 2k in Goat Herds
Microbiol Spectr, 10 (4), e0157122
DOI 10.1128/spectrum.01571-22, PubMed 35938860
Genomic Characterization of Escherichia coli O8 Strains Producing Shiga Toxin 2l Subtype
Microorganisms, 10 (6)
DOI 10.3390/microorganisms10061245, PubMed 35744763
Waves of sumoylation support transcription dynamics during adipocyte differentiation
Nucleic Acids Res, 50 (3), 1351-1369
DOI 10.1093/nar/gkac027, PubMed 35100417
Stability and Feasibility of Dried Blood Spots for Hepatitis E Virus Serology in a Rural Setting
Viruses, 14 (11)
DOI 10.3390/v14112525, PubMed 36423134