Publika - Scientific publications from Oslo University Hospital

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Publications (original articles or review articles) published in 2022 from OUS - Department of Microbiology

27 publications found

Ali O, Farooq A, Yang M, Jin VX, Bjørås M, Wang J (2022)
abc4pwm: affinity based clustering for position weight matrices in applications of DNA sequence analysis
BMC Bioinformatics, 23 (1), 83
DOI 10.1186/s12859-022-04615-z, PubMed 35240993

Avershina E, Frye SA, Ali J, Taxt AM, Ahmad R (2022)
Ultrafast and Cost-Effective Pathogen Identification and Resistance Gene Detection in a Clinical Setting Using Nanopore Flongle Sequencing
Front Microbiol, 13, 822402
DOI 10.3389/fmicb.2022.822402, PubMed 35369431

Birhanu AG, Gómez-Muñoz M, Kalayou S, Riaz T, Lutter T, Yimer SA, Abebe M, Tønjum T (2022)
Proteome Profiling of Mycobacterium tuberculosis Cells Exposed to Nitrosative Stress
ACS Omega, 7 (4), 3470-3482
DOI 10.1021/acsomega.1c05923, PubMed 35128256

Brigtsen AK, Jacobsen AF, Dedi L, Melby KK, Espeland CN, Fugelseth D, Whitelaw A (2022)
Group B Streptococcus colonization at delivery is associated with maternal peripartum infection
PLoS One, 17 (4), e0264309
DOI 10.1371/journal.pone.0264309, PubMed 35363775

Campbell SM, Pettersen FO, Brekke H, Hanevik K, Robertson LJ (2022)
Transition to PCR diagnosis of cryptosporidiosis and giardiasis in the Norwegian healthcare system: could the increase in reported cases be due to higher sensitivity or a change in the testing algorithm?
Eur J Clin Microbiol Infect Dis, 41 (5), 835-839
DOI 10.1007/s10096-022-04426-3, PubMed 35243573

Christensen I, Berild D, Jelsness-Jørgensen LP, Bjørnholt JV, Haug JB (2022)
Tailored interventions result in better antimicrobial management in Norwegian hospitals
Tidsskr Nor Laegeforen, 142 (5)
DOI 10.4045/tidsskr.22.0094, PubMed 35324115

Christensen I, Haug JB, Berild D, Bjørnholt JV, Skodvin B, Jelsness-Jørgensen LP (2022)
Factors Affecting Antibiotic Prescription among Hospital Physicians in a Low-Antimicrobial-Resistance Country: A Qualitative Study
Antibiotics (Basel), 11 (1)
DOI 10.3390/antibiotics11010098, PubMed 35052975

Ellingjord-Dale M, Kalleberg KT, Istre MS, Nygaard AB, Brunvoll SH, Eggesbø LM, Dahl JA, Kjetland EF, Ursin G, Søraas A (2022)
The use of public transport and contraction of SARS-CoV-2 in a large prospective cohort in Norway
BMC Infect Dis, 22 (1), 252
DOI 10.1186/s12879-022-07233-5, PubMed 35287611

Enserink JM, Chymkowitch P (2022)
Cell Cycle-Dependent Transcription: The Cyclin Dependent Kinase Cdk1 Is a Direct Regulator of Basal Transcription Machineries
Int J Mol Sci, 23 (3)
DOI 10.3390/ijms23031293, PubMed 35163213

Gohli J, Anderson AM, Brantsaeter AB, Bøifot KO, Grub C, Hadley CL, Lind A, Pettersen ES, Søraas AVL, Dybwad M (2022)
Dispersion of SARS-CoV-2 in air surrounding COVID-19-infected individuals with mild symptoms
Indoor Air, 32 (2), e13001
DOI 10.1111/ina.13001, PubMed 35225394

Hansen AM, Ge Y, Schuster MB, Pundhir S, Jakobsen JS, Kalvisa A, Tapia MC, Gordon S, Ambri F, Bagger FO, Pandey D, Helin K, Porse BT (2022)
H3K9 dimethylation safeguards cancer cells against activation of the interferon pathway
Sci Adv, 8 (11), eabf8627
DOI 10.1126/sciadv.abf8627, PubMed 35302840

Karlsen TR, Olsen MB, Kong XY, Yang K, Quiles-Jiménez A, Kroustallaki P, Holm S, Lines GT, Aukrust P, Skarpengland T, Bjørås M, Dahl TB, Nilsen H, Gregersen I, Halvorsen B (2022)
NEIL3-deficient bone marrow displays decreased hematopoietic capacity and reduced telomere length
Biochem Biophys Rep, 29, 101211
DOI 10.1016/j.bbrep.2022.101211, PubMed 35079641

Khodeer S, Klungland A, Dahl JA (2022)
ALKBH5 regulates somatic cell reprogramming in a phase specific manner
J Cell Sci (in press)
DOI 10.1242/jcs.259824, PubMed 35552718

Magnusson C, Mernelius S, Bengnér M, Norén T, Serrander L, Forshell S, Matussek A (2022)
Characterization of a Clostridioides difficile outbreak caused by PCR ribotype 046, associated with increased mortality
Emerg Microbes Infect, 11 (1), 850-859
DOI 10.1080/22221751.2022.2049981, PubMed 35240942

Nestegard O, Moayeri B, Halvorsen FA, Tønnesen T, Sørbye SW, Paulssen E, Johnsen KM, Goll R, Florholmen JR, Melby KK (2022)
Helicobacter pylori resistance to antibiotics before and after treatment: Incidence of eradication failure
PLoS One, 17 (4), e0265322
DOI 10.1371/journal.pone.0265322, PubMed 35442962

Odsbu I, Handal M, Borchgrevink PC, Clausen T, Skurtveit S (2022)
Changes in opioid use in Norway must be taken with the utmost seriousness
Tidsskr Nor Laegeforen, 142 (3)
DOI 10.4045/tidsskr.21.0909, PubMed 35170914

Odsbu I, Handal M, Hjellvik V, Borchgrevink PC, Clausen T, Nesvåg R, Skurtveit S (2022)
Long-term use of opioids and concomitant use of other habit-forming drugs
Tidsskr Nor Laegeforen, 142 (3)
DOI 10.4045/tidsskr.21.0659, PubMed 35170913

Onken A, Haanshuus CG, Miraji MK, Marijani M, Kibwana KO, Abeid KA, Mørch K, Reimers M, Langeland N, Müller F, Jenum PA, Blomberg B (2022)
Malaria prevalence and performance of diagnostic tests among patients hospitalized with acute undifferentiated fever in Zanzibar
Malar J, 21 (1), 54
DOI 10.1186/s12936-022-04067-z, PubMed 35183188

Oppen K, Ueland T, Michelsen AE, Aukrust P, Steinsvik T, Skadberg Ø, Brede C, Siljan WW, Husebye E, Holter JC, Heggelund L (2022)
Hepcidin predicts 5-year mortality after community-acquired pneumonia
Infect Dis (Lond), 54 (6), 403-409
DOI 10.1080/23744235.2021.2022194, PubMed 35057702

Quiles-Jiménez A, Dahl TB, Bjørås M, Alseth I, Halvorsen B, Gregersen I (2022)
Epitranscriptome in Ischemic Cardiovascular Disease: Potential Target for Therapies
Stroke, STROKEAHA121037581 (in press)
DOI 10.1161/STROKEAHA.121.037581, PubMed 35240858

Rodriguez-Temporal D, Alcaide F, Mareković I, O'Connor JA, Gorton R, van Ingen J, Van den Bossche A, Héry-Arnaud G, Beauruelle C, Orth-Höller D, Palacios-Gutiérrez JJ, Tudó G, Bou G, Ceyssens PJ, Garrigó M, González-Martin J, Greub G, Hrabak J, Ingebretsen A, Mediavilla-Gradolph MC, Oviaño M, Palop B, Pranada AB, Quiroga L, Ruiz-Serrano MJ et al. (2022)
Multicentre study on the reproducibility of MALDI-TOF MS for nontuberculous mycobacteria identification
Sci Rep, 12 (1), 1237
DOI 10.1038/s41598-022-05315-7, PubMed 35075208

Su Z, Monshaugen I, Wilson B, Wang F, Klungland A, Ougland R, Dutta A (2022)
TRMT6/61A-dependent base methylation of tRNA-derived fragments regulates gene-silencing activity and the unfolded protein response in bladder cancer
Nat Commun, 13 (1), 2165
DOI 10.1038/s41467-022-29790-8, PubMed 35444240

Sumathipala D, Strømme P, Fattahi Z, Lüders T, Sheng Y, Kahrizi K, Einarsen IH, Sloan JL, Najmabadi H, van den Heuvel L, Wevers RA, Guerrero-Castillo S, Mørkrid L, Valayannopoulos V, Backe PH, Venditti CP, van Karnebeek CD, Nilsen H, Frengen E, Misceo D (2022)
ZBTB11 dysfunction: spectrum of brain abnormalities, biochemical signature and cellular consequences
Brain (in press)
DOI 10.1093/brain/awac034, PubMed 35104841

Syversen SW, Jyssum I, Tveter AT, Tran TT, Sexton J, Provan SA, Mjaaland S, Warren DJ, Kvien TK, Grødeland G, Nissen-Meyer LSH, Ricanek P, Chopra A, Andersson AM, Kro GB, Jahnsen J, Munthe LA, Haavardsholm EA, Vaage JT, Lund-Johansen F, Jørgensen KK, Goll GL (2022)
Immunogenicity and Safety of Standard and Third Dose SARS-CoV-2 Vaccination in Patients on Immunosuppressive Therapy
Arthritis Rheumatol (in press)
DOI 10.1002/art.42153, PubMed 35507355

Van der Auwera G, Davidsson L, Buffet P, Ruf MT, Gramiccia M, Varani S, Chicharro C, Bart A, Harms G, Chiodini PL, Brekke H, Robert-Gangneux F, Cortes S, Verweij JJ, Scarabello A, Karlsson Söbirk S, Guéry R, van Henten S, Di Muccio T, Carra E, van Thiel P, Vandeputte M, Gaspari V, Blum J, LeishMan Surveillance network et al. (2022)
Surveillance of leishmaniasis cases from 15 European centres, 2014 to 2019: a retrospective analysis
Euro Surveill, 27 (4)
DOI 10.2807/1560-7917.ES.2022.27.4.2002028, PubMed 35086613

Wæhre T, Tunheim G, Bodin JE, Laake I, Kvale D, Kran AB, Brekke H, Løken R, Oftung F, Mjaaland S, Dyrhol-Riise AM (2022)
Clinical characteristics and outcomes in hospitalized adult influenza patients: an observational study from Norway 2014-2018
Infect Dis (Lond), 54 (5), 367-377
DOI 10.1080/23744235.2021.2022196, PubMed 34983302

Zhao X, Hendriks IA, Le Gras S, Ye T, Ramos-Alonso L, Nguéa P A, Lien GF, Ghasemi F, Klungland A, Jost B, Enserink JM, Nielsen ML, Chymkowitch P (2022)
Waves of sumoylation support transcription dynamics during adipocyte differentiation
Nucleic Acids Res, 50 (3), 1351-1369
DOI 10.1093/nar/gkac027, PubMed 35100417

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